Monthly Archives: January 2020

CellCoal: NGS simulation of single-cell somatic evolution

Check my new simulatorĀ CellCoalĀ for the coalescent simulation of single-cell sequencing genotypes. CellCoal simulates the history of single-cell samples obtained from somatic cell populations with different demographic histories and produces single-nucleotide variants under a variety of mutation models, sequencing read counts, … Continue reading

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A next-generation version of modeltest

The Stamatakis lab as taken over the Modeltest series! check Modeltest-NG. ModelTest-NG is much faster than jModelTest and ProtTest but equally accurate and introduces new features, such as ascertainment bias correction, mixture, and free-rate models, or the automatic processing of … Continue reading

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