ProtTest icon ProtTest server
based on Pal & Phyml
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Input an alignment and (optionally) a tree
 Select a protein alignment
 Tree (in newick format) Build BioNJ tree User tree

Model Selection options
 Model Selection Criterion
 Sample size interpretation (for AICc and BIC)
Additional options
 Optimize tree topology? Yes No
 Display a comparison of seven different model selection frameworks? Yes, please No, thanks
 Print "best" tree in Newick or ASCII format?
Results will be sent by email
 Name this analysis
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Citation: Abascal F, Zardoya R, Posada D. (2005)
ProtTest: Selection of best-fit models of protein evolution.
Bioinformatics: 21(9):2104-2105.

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This document last modified Wednesday April 22, 2009