New paper on HPC jmodeltest


A new paper benchmarking  the High Performance Computing version of jmodeltest2 is available online. This is a collaboration with Ramon Doallo’s HPC group at the University of Coruña, and lead by our joint graduate student Diego Darriba. Here we discuss different parallelization strategies and demonstrate high scalability, with speedups of the multithreaded version of up to 32, and up to 257 for the hybrid shared/distributed memory.

High-performance computing selection of models of DNA substitution for multicore clusters


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